Publications

Found 71 results
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Journal Article
Ciftcioglu, E. Necdet, S. Pal, K. S. Chan, D. H. Cansever, A. Swami, A. K. Singh, and P. Basu, "Topology Design Games and Dynamics in Adversarial Environments", IEEE Journal on Selected Areas in Communications, vol. 35, pp. 628–642, 2017.
Bogdanov, P., M. Busch, J. Moehlis, A. K. Singh, and B. K. Szymanski, "The Social Media Genome: Modeling Individual Topic-Specific Behavior in Social Media", CoRR, vol. abs/1307.0309, 2013.
Bogdanov, P., M. Busch, J. Moehlis, A. K. Singh, and B. K. Szymanski, "The Social Media Genome: Modeling Individual Topic-Specific Behavior in Social Media", CoRR, vol. abs/1307.0309, 2013.
Askarisichani, O., F. Bullo, N. E. Friedkin, and A. K. Singh, "Predictive models for human–AI nexus in group decision making", Annals of the New York Academy of Sciences, vol. 1514, pp. 70–81, 2022.
Amelkin, V., F. Bullo, and A. K. Singh, "Polar Opinion Dynamics in Social Networks", IEEE Transactions on Automatic Control (TAC), 2017.
Dang, X-H., A. Silva, A. Singh, A. Swami, and P. Basu, "Outlier Detection from Network Data with Subnetwork Interpretation", IEEE International Conference Data Mining (ICDM), 2016.
Bulut, A., N. Koudas, A. Meka, A. K. Singh, and D. Srivastava, "Optimization Techniques for Reactive Network Monitoring", {IEEE} Trans. Knowl. Data Eng., vol. 21, no. 9, pp. 1343–1357, 2009.
Bogdanov, P., and A. K. Singh, "Molecular Function Prediction Using Neighborhood Features", {IEEE/ACM} Trans. Comput. Biology Bioinform., vol. 7, no. 2, pp. 208–217, 2010.
Laos, V., D. Bishop, C. A. Lang, N. M. Marsh, K. Lazar Cantrell, S. K. Buratto, A. K. Singh, and M. T. Bowers, "Modulating ALS-Related Amyloidogenic TDP-43307–319 Oligomeric Aggregates with Computationally Derived Therapeutic Molecules", Biochemistry, vol. 59, pp. 499–508, 2019.
Laos, V., D. Bishop, C. A. Lang, N. M. Marsh, K. Lazar Cantrell, S. K. Buratto, A. K. Singh, and M. T. Bowers, "Modulating ALS-Related Amyloidogenic TDP-43307–319 Oligomeric Aggregates with Computationally Derived Therapeutic Molecules", Biochemistry, vol. 59, pp. 499–508, 2019.
Laos, V., D. Bishop, C. A. Lang, N. M. Marsh, K. Lazar Cantrell, S. K. Buratto, A. K. Singh, and M. T. Bowers, "Modulating ALS-Related Amyloidogenic TDP-43307–319 Oligomeric Aggregates with Computationally Derived Therapeutic Molecules", Biochemistry, vol. 59, pp. 499–508, 2019.
Bogdanov, P., M. Busch, J. Moehlis, A. K. Singh, and B. K. Szymanski, "Modeling individual topic-specific behavior and influence backbone networks in social media", Social Netw. Analys. Mining, vol. 4, no. 1, pp. 204, 2014.
Bogdanov, P., M. Busch, J. Moehlis, A. K. Singh, and B. K. Szymanski, "Modeling individual topic-specific behavior and influence backbone networks in social media", Social Netw. Analys. Mining, vol. 4, no. 1, pp. 204, 2014.
Ye, W., F. Bullo, N. E. Friedkin, and A. K. Singh, "Modeling Human-AI Team Decision Making", CoRR, vol. abs/2201.02759, 2022.
Medya, S., P. Bogdanov, and A. Singh, "Making a Small World Smaller: Path Optimization in Networks", IEEE Transactions on Knowledge and Data Engineering (TKDE), 2018.
Jaffe, S., A. Davydov, D. Lapsekili, A. K. Singh, and F. Bullo, "Learning Neural Contracting Dynamics: Extended Linearization and Global Guarantees", CoRR, vol. abs/2402.08090, 2024.
Bogdanov, P., N. Dereli, X-H. Dang, D. S. Bassett, N. F. Wymbs, S. T. Grafton, and A. K. Singh, "Learning about learning: Mining human brain sub-network biomarkers from fMRI data", PLoS one, vol. 12, pp. e0184344, 2017.
Bogdanov, P., N. Dereli, X-H. Dang, D. S. Bassett, N. F. Wymbs, S. T. Grafton, and A. K. Singh, "Learning about learning: Mining human brain sub-network biomarkers from fMRI data", PLoS one, vol. 12, pp. e0184344, 2017.
Downey, M. A., M. J. Giammona, C. A. Lang, S. K. Buratto, A. Singh, and M. T. Bowers, "Inhibiting and remodeling toxic amyloid-beta oligomer formation using a computationally designed drug molecule that targets Alzheimer’s disease", Journal of The American Society for Mass Spectrometry, vol. 30, pp. 85–93, 2018.
Downey, M. A., M. J. Giammona, C. A. Lang, S. K. Buratto, A. Singh, and M. T. Bowers, "Inhibiting and remodeling toxic amyloid-beta oligomer formation using a computationally designed drug molecule that targets Alzheimer’s disease", Journal of The American Society for Mass Spectrometry, vol. 30, pp. 85–93, 2018.
Hill, S. M., L. M. Heiser, T. Cokelaer, M. Unger, N. K. Nesser, D. E. Carlin, Y. Zhang, A. Sokolov, E. O. Paull, C. K. Wong, et al., "Inferring causal molecular networks: empirical assessment through a community-based effort", Nature methods, vol. 13, pp. 310–318, 2016.
Hill, S. M., L. M. Heiser, T. Cokelaer, M. Unger, N. K. Nesser, D. E. Carlin, Y. Zhang, A. Sokolov, E. O. Paull, C. K. Wong, et al., "Inferring causal molecular networks: empirical assessment through a community-based effort", Nature methods, vol. 13, pp. 310–318, 2016.
Ye, W., D. Mautz, C. Böhm, A. K. Singh, and C. Plant, "Incorporating User's Preference into Attributed Graph Clustering", IEEE Trans. Knowl. Data Eng., vol. 33, pp. 3716–3728, 2021.
Bhattacharya, A., S. Levy, A. LeBoeuf, M. Gaylord, L. Wilson, A. K. Singh, and S. C. Feinstein, "A general modeling and visualization tool for comparing different members of a group: application to studying tau-mediated regulation of microtubule dynamics", {BMC} Bioinformatics, vol. 9, 2008.
Bhattacharya, A., A. Bhowmick, and A. K. Singh, "Finding top-k similar pairs of objects annotated with terms from an ontology", CoRR, vol. abs/1001.2625, 2010.
Bhattacharya, A., A. Bhowmick, and A. K. Singh, "Finding top-k similar pairs of objects annotated with terms from an ontology", CoRR, vol. abs/1001.2625, 2010.
Singh, V., A. Bhattacharya, and A. K. Singh, "Finding Significant Subregions in Large Image Databases", CoRR, vol. abs/0906.3585, 2009.
Askarisichani, O., E. Y. Huang, K. S. Sato, N. E. Friedkin, F. Bullo, and A. K. Singh, "Expertise and confidence explain how social influence evolves along intellective tasks", CoRR, vol. abs/2011.07168, 2020.
Jin, Y., M. A. Downey, A. Singh, S. K. Buratto, and M. T. Bowers, "Computationally designed small molecules disassemble both soluble oligomers and protofibrils of amyloid β-protein responsible for Alzheimer’s disease", ACS Chemical Neuroscience, vol. 14, pp. 2717–2726, 2023.
Jin, Y., M. A. Downey, A. Singh, S. K. Buratto, and M. T. Bowers, "Computationally designed small molecules disassemble both soluble oligomers and protofibrils of amyloid β-protein responsible for Alzheimer’s disease", ACS Chemical Neuroscience, vol. 14, pp. 2717–2726, 2023.
Copp, S. M., P. Bogdanov, M. Debord, A. Singh, and E. Gwinn, "Base motif recognition and design of DNA templates for fluorescent silver clusters by machine learning", Advanced Materials, vol. 26, pp. 5839–5845, 2014.
Conference Proceedings
Bhowmick, A., M. Kosan, Z. Huang, A. Singh, and S. Medya, "DGCLUSTER: A Neural Framework for Attributed Graph Clustering via Modularity Maximization", The 38th Annual AAAI Conference on Artificial Intelligence (AAAI'24), 2024.
Conference Paper
Bhattacharya, A., V. Ljosa, J-Y. Pan, M. R. Verardo, H-J. Yang, C. Faloutsos, and A. K. Singh, "ViVo: Visual Vocabulary Construction for Mining Biomedical Images", Proceedings of the 5th {IEEE} International Conference on Data Mining {(ICDM} 2005), 27-30 November 2005, Houston, Texas, {USA}, pp. 50–57, 2005.
Bulut, A., and A. K. Singh, "A Unified Framework for Monitoring Data Streams in Real Time", Proceedings of the 21st International Conference on Data Engineering, {ICDE} 2005, 5-8 April 2005, Tokyo, Japan, pp. 44–55, 2005.
Medya, S., P. Bogdanov, and A. K. Singh, "Towards Scalable Network Delay Minimization", {IEEE} 16th International Conference on Data Mining, {ICDM} 2016, December 12-15, 2016, Barcelona, Spain, 2016.
Bogdanov, P., N. D. Larusso, and A. K. Singh, "Towards Community Discovery in Signed Collaborative Interaction Networks", {ICDMW} 2010, The 10th {IEEE} International Conference on Data Mining Workshops, Sydney, Australia, 13 December 2010, pp. 288–295, 2010.
Ciftcioglu, E. N., S. Pal, K. S. Chan, D. H. Cansever, A. Swami, A. K. Singh, and P. Basu, "Topology design under adversarial dynamics", 14th International Symposium on Modeling and Optimization in Mobile, Ad Hoc, and Wireless Networks, WiOpt 2016, Tempe, AZ, USA, May 9-13, 2016, 2016.
Bulut, A., and A. K. Singh, "SWAT: Hierarchical Stream Summarization in Large Networks", Proceedings of the 19th International Conference on Data Engineering, March 5-8, 2003, Bangalore, India, pp. 303–314, 2003.
Bogdanov, P., M. Busch, J. Moehlis, A. K. Singh, and B. K. Szymanski, "The social media genome: modeling individual topic-specific behavior in social media", Advances in Social Networks Analysis and Mining 2013, {ASONAM} '13, Niagara, ON, Canada - August 25 - 29, 2013, pp. 236–242, 2013.
Bogdanov, P., M. Busch, J. Moehlis, A. K. Singh, and B. K. Szymanski, "The social media genome: modeling individual topic-specific behavior in social media", Advances in Social Networks Analysis and Mining 2013, {ASONAM} '13, Niagara, ON, Canada - August 25 - 29, 2013, pp. 236–242, 2013.
Mongiov\`ı, M., P. Bogdanov, R. Ranca, A. K. Singh, E. E. Papalexakis, and C. Faloutsos, "SigSpot: mining significant anomalous regions from time-evolving networks (abstract only)", Proceedings of the {ACM} {SIGMOD} International Conference on Management of Data, {SIGMOD} 2012, Scottsdale, AZ, USA, May 20-24, 2012, pp. 865, 2012.
Singh, V., A. Bhattacharya, and A. K. Singh, "Querying spatial patterns", {EDBT} 2010, 13th International Conference on Extending Database Technology, Lausanne, Switzerland, March 22-26, 2010, Proceedings, pp. 418–429, 2010.
Bhattacharya, A., T. Can, T. Kahveci, A. K. Singh, and Y-F. Wang, "ProGreSS: Simultaneous Searching of Protein Databases by Sequence and Structure", Biocomputing 2004, Proceedings of the Pacific Symposium, Hawaii, USA, 6-10 January 2004, pp. 264–275, 2004.
Bogdanov, P., C. Faloutsos, M. Mongiov\`ı, E. E. Papalexakis, R. Ranca, and A. K. Singh, "NetSpot: Spotting Significant Anomalous Regions on Dynamic Networks", Proceedings of the 13th {SIAM} International Conference on Data Mining, May 2-4, 2013. Austin, Texas, {USA.}, pp. 28–36, 2013.
Bhattacharya, A., A. Meka, and A. K. Singh, "MIST: Distributed Indexing and Querying in Sensor Networks using Statistical Models", Proceedings of the 33rd International Conference on Very Large Data Bases, University of Vienna, Austria, September 23-27, 2007, pp. 854–865, 2007.
Bogdanov, P., M. Mongiov\`ı, and A. K. Singh, "Mining Heavy Subgraphs in Time-Evolving Networks", 11th {IEEE} International Conference on Data Mining, {ICDM} 2011, Vancouver, BC, Canada, December 11-14, 2011, pp. 81–90, 2011.
Mongiov\`ı, M., P. Bogdanov, and A. K. Singh, "Mining Evolving Network Processes", 2013 {IEEE} 13th International Conference on Data Mining, Dallas, TX, USA, December 7-10, 2013, pp. 537–546, 2013.
Dang, X. Hong, H. You, P. Bogdanov, and A. K. Singh, "Learning Predictive Substructures with Regularization for Network Data", Data Mining (ICDM), 2015 IEEE International Conference on: IEEE, 2015.
Ljosa, V., A. Bhattacharya, and A. K. Singh, "LB-Index: A Multi-Resolution Index Structure for Images", Proceedings of the 22nd International Conference on Data Engineering, {ICDE} 2006, 3-8 April 2006, Atlanta, GA, {USA}, pp. 144, 2006.
Seccamonte, F., A. K. Singh, and F. Bullo, "Inference of Infrastructure Network Flows via Physics-Inspired Implicit Neural Networks", IEEE Conference on Control Technology and Applications, CCTA 2023, Bridgetown, Barbados, August 16-18, 2023: IEEE, 2023.
Ljosa, V., A. Bhattacharya, and A. K. Singh, "Indexing Spatially Sensitive Distance Measures Using Multi-resolution Lower Bounds", Advances in Database Technology - {EDBT} 2006, 10th International Conference on Extending Database Technology, Munich, Germany, March 26-31, 2006, Proceedings, pp. 865–883, 2006.
Macropol, K., P. Bogdanov, A. K. Singh, L. R. Petzold, and X. Yan, "I act, therefore I judge: network sentiment dynamics based on user activity change", Advances in Social Networks Analysis and Mining 2013, {ASONAM} '13, Niagara, ON, Canada - August 25 - 29, 2013, pp. 396–402, 2013.
Silva, A., P. Bogdanov, and A. K. Singh, "Hierarchical in-network attribute compression via importance sampling", 31st {IEEE} International Conference on Data Engineering, {ICDE} 2015, Seoul, South Korea, April 13-17, 2015, pp. 951–962, 2015.
Medya, S., A. Silva, A. Singh, P. Basu, and A. Swami, "Group centrality maximization via network design", SIAM International Conference on Data Mining (SDM), 2018.
Silva, A., X. Hong Dang, P. Basu, A. Singh, and A. Swami, "Graph Wavelets via Sparse Cuts", Proceedings of the 22nd ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2016.
Bhattacharya, A., A. Bhowmick, and A. K. Singh, "Finding Top-k Similar Pairs of Objects Annotated with Terms from an Ontology", Scientific and Statistical Database Management, 22nd International Conference, {SSDBM} 2010, Heidelberg, Germany, June 30 - July 2, 2010. Proceedings, pp. 214–232, 2010.
Bhattacharya, A., A. Bhowmick, and A. K. Singh, "Finding Top-k Similar Pairs of Objects Annotated with Terms from an Ontology", Scientific and Statistical Database Management, 22nd International Conference, {SSDBM} 2010, Heidelberg, Germany, June 30 - July 2, 2010. Proceedings, pp. 214–232, 2010.
Singh, V., A. Bhattacharya, and A. K. Singh, "Efficient Computation of Statistical Significance of Query Results in Databases", Scientific and Statistical Database Management, 20th International Conference, {SSDBM} 2008, Hong Kong, China, July 9-11, 2008, Proceedings, pp. 509–516, 2008.
Bulut, A., A. K. Singh, and R. Vitenberg, "Distributed Data Streams Indexing using Content-Based Routing Paradigm", 19th International Parallel and Distributed Processing Symposium {(IPDPS} 2005), {CD-ROM} / Abstracts Proceedings, 4-8 April 2005, Denver, CO, {USA}, 2005.
Amelkin, V., P. Bogdanov, and A. K. Singh, "A Distance Measure for the Analysis of Polar Opinion Dynamics in Social Networks", IEEE International Conference on Data Engineering (ICDE), San Diego, California, US, IEEE, 04/2017.
Dang, X. Hong, A. K. Singh, P. Bogdanov, H. You, and B. Hsu, "Discriminative Subnetworks with Regularized Spectral Learning for Global-State Network Data", Machine Learning and Knowledge Discovery in Databases - European Conference, {ECML} {PKDD} 2014, Nancy, France, September 15-19, 2014. Proceedings, Part {I}, pp. 290–306, 2014.
Singh, A. K., A. Bhattacharya, and V. Ljosa, "Current Challenges in Bioimage Database Design", Fourth International {IEEE} Computer Society Computational Systems Bioinformatics Conference Workshops {&} Poster Abstracts, {CSB} 2005 Workshops, Stanford, CA, USA, August 8-11, 2005, pp. 375–379, 2005.
Nguyen, D-A., T. Abdelzaher, S. Borbash, X-H. Dang, R. Ganti, A. Singh, and M. Srivatsa, "On Critical Event Observability Using Social Networks: A Disaster Monitoring Perspective", Military Communications Conference (MILCOM), 2014 IEEE: IEEE, 2014.
Silva, A., F. Kocayusufoglu, S. Jafarpour, F. Bullo, A. Swami, and A. K. Singh, "Combining Physics and Machine Learning for Network Flow Estimation", 9th International Conference on Learning Representations, ICLR 2021, Virtual Event, Austria, May 3-7, 2021: OpenReview.net, 2021.
Bogdanov, P., B. Baumer, P. Basu, A. Bar-Noy, and A. K. Singh, "As Strong as the Weakest Link: Mining Diverse Cliques in Weighted Graphs", Machine Learning and Knowledge Discovery in Databases - European Conference, {ECML} {PKDD} 2013, Prague, Czech Republic, September 23-27, 2013, Proceedings, Part {I}, pp. 525–540, 2013.
Bogdanov, P., B. Baumer, P. Basu, A. Bar-Noy, and A. K. Singh, "As Strong as the Weakest Link: Mining Diverse Cliques in Weighted Graphs", Machine Learning and Knowledge Discovery in Databases - European Conference, {ECML} {PKDD} 2013, Prague, Czech Republic, September 23-27, 2013, Proceedings, Part {I}, pp. 525–540, 2013.
Bogdanov, P., B. Baumer, P. Basu, A. Bar-Noy, and A. K. Singh, "As Strong as the Weakest Link: Mining Diverse Cliques in Weighted Graphs", Machine Learning and Knowledge Discovery in Databases - European Conference, {ECML} {PKDD} 2013, Prague, Czech Republic, September 23-27, 2013, Proceedings, Part {I}, pp. 525–540, 2013.
Bogdanov, P., B. Baumer, P. Basu, A. Bar-Noy, and A. K. Singh, "As Strong as the Weakest Link: Mining Diverse Cliques in Weighted Graphs", Machine Learning and Knowledge Discovery in Databases - European Conference, {ECML} {PKDD} 2013, Prague, Czech Republic, September 23-27, 2013, Proceedings, Part {I}, pp. 525–540, 2013.
Bulut, A., R. Vitenberg, F. Emekçi, and A. K. Singh, "An Adaptive and Scalable Middleware for Distributed Indexing of Data Streams", Databases, Information Systems, and Peer-to-Peer Computing, First International Workshop, DBISP2P, Berlin Germany, September 7-8, 2003, Revised Papers, pp. 123–137, 2003.
Bogdanov, P., and A. K. Singh, "Accurate and scalable nearest neighbors in large networks based on effective importance", 22nd {ACM} International Conference on Information and Knowledge Management, CIKM'13, San Francisco, CA, USA, October 27 - November 1, 2013, pp. 1009–1018, 2013.
Book Chapter
Bulut, A., and A. K. Singh, "Indexing and Querying Data Streams", Data Streams - Models and Algorithms, pp. 237–259, 2007.