Publications
"Herding "small" streaming queries", Proceedings of the 9th {ACM} International Conference on Distributed Event-Based Systems, {DEBS} '15, Oslo, Norway, June 29 - July 3, 2015, 2015.
, "Inferring the Underlying Structure of Information Cascades", 12th {IEEE} International Conference on Data Mining, {ICDM} 2012, Brussels, Belgium, December 10-13, 2012, pp. 1218–1223, 2012.
, "Behavior Query Discovery in System-Generated Temporal Graphs", {PVLDB}, vol. 9, pp. 240–251, 2015.
, "Towards scalable critical alert mining", The 20th {ACM} {SIGKDD} International Conference on Knowledge Discovery and Data Mining, {KDD} '14, New York, NY, {USA} - August 24 - 27, 2014, pp. 1057–1066, 2014.
, "Cloud service placement via subgraph matching", {IEEE} 30th International Conference on Data Engineering, Chicago, {ICDE} 2014, IL, USA, March 31 - April 4, 2014, pp. 832–843, 2014.
, "Inferring the Underlying Structure of Information Cascades", CoRR, vol. abs/1210.3587, 2012.
, "DANR: Discrepancy-aware Network Regularization", SIAM International Conference on Data Mining (SDM), 2020.
, "Tree++: Truncated Tree Based Graph Kernels", IEEE Trans. Knowl. Data Eng., vol. 33, pp. 1778–1789, 2021.
, "Incorporating Heterophily into Graph Neural Networks for Graph Classification", CoRR, vol. abs/2203.07678, 2022.
, "Graph Neural Diffusion Networks for Semi-supervised Learning", CoRR, vol. abs/2201.09698, 2022.
, "Modeling Human-AI Team Decision Making", CoRR, vol. abs/2201.02759, 2022.
, "Incorporating User's Preference into Attributed Graph Clustering", IEEE Trans. Knowl. Data Eng., vol. 33, pp. 3716–3728, 2021.
, "Learning Deep Graph Representations via Convolutional Neural Networks", IEEE Trans. Knowl. Data Eng., vol. 34, pp. 2268–2279, 2022.
, "Static and Dynamic Structural Correlations in Graphs", {IEEE} Trans. Knowl. Data Eng., vol. 25, no. 9, pp. 2147–2160, 2013.
, "Increasing Concurrency in Databases Using Program Analysis", {ECOOP} 2004 - Object-Oriented Programming, 18th European Conference, Oslo, Norway, June 14-18, 2004, Proceedings, pp. 341–363, 2004.
, "Analyzing Performance of Lease-Based Schemes under Failures", 30th {IEEE} Symposium on Reliable Distributed Systems {(SRDS} 2011), Madrid, Spain, October 4-7, 2011, pp. 193–202, 2011.
, "The Spread of Physical Activity Through Social Networks", Proceedings of the 26th International Conference on World Wide Web: ACM, 2017.
, "Geo-clustering of Images with Missing GeoTags", 2010 {IEEE} International Conference on Granular Computing, GrC 2010, San Jose, California, USA, 14-16 August 2010, pp. 420–425, 2010.
, "Scalable Index Structures for Biological Data", Data Mining in Bioinformatics, pp. 275–296, 2005.
, "Querying spatial patterns", {EDBT} 2010, 13th International Conference on Extending Database Technology, Lausanne, Switzerland, March 22-26, 2010, Proceedings, pp. 418–429, 2010.
, "Current Challenges in Bioimage Database Design", Fourth International {IEEE} Computer Society Computational Systems Bioinformatics Conference Workshops {&} Poster Abstracts, {CSB} 2005 Workshops, Stanford, CA, USA, August 8-11, 2005, pp. 375–379, 2005.
, "A Distributed Database for BioMolecular Images", {SIGMOD} Record, vol. 33, no. 2, pp. 65–71, 2004.
, "Querying and Mining Biological Databases", {OMICS}, vol. 7, no. 1, pp. 7–8, 2003.
, "Finding Significant Subregions in Large Image Databases", CoRR, vol. abs/0906.3585, 2009.
, "Nearest Keyword Set Search in Multi-Dimensional Datasets", {IEEE} Trans. Knowl. Data Eng., vol. 28, pp. 741–755, 2016.
, "SIMP: accurate and efficient near neighbor search in high dimensional spaces", 15th International Conference on Extending Database Technology, {EDBT} '12, Berlin, Germany, March 27-30, 2012, Proceedings, pp. 492–503, 2012.
, "Efficient Computation of Statistical Significance of Query Results in Databases", Scientific and Statistical Database Management, 20th International Conference, {SSDBM} 2008, Hong Kong, China, July 9-11, 2008, Proceedings, pp. 509–516, 2008.
, "Nearest Keyword Set Search in Multi-dimensional Datasets", CoRR, vol. abs/1409.3867, 2014.
, "Modeling Complex Diseases Using Discriminative Network Fragments - (Invited Keynote Talk)", Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings, pp. 249, 2012.
, "Profile Based Sub-Image Search in Image Databases", CoRR, vol. abs/1010.1496, 2010.
, " Spectral Algorithms for Temporal Graph Cuts", The Web Conference (WWW), 2018.
, "Graph Wavelets via Sparse Cuts", Proceedings of the 22nd ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2016.
, "Hierarchical in-network attribute compression via importance sampling", 31st {IEEE} International Conference on Data Engineering, {ICDE} 2015, Seoul, South Korea, April 13-17, 2015, pp. 951–962, 2015.
, "Combining Physics and Machine Learning for Network Flow Estimation", 9th International Conference on Learning Representations, ICLR 2021, Virtual Event, Austria, May 3-7, 2021: OpenReview.net, 2021.
, "Group Testing on a Network", AAAI Conference on Artificial Intelligence, 2021.
, "Learning Prototype Classifiers for Long-Tailed Recognition", Proceedings of the Thirty-Second International Joint Conference on Artificial Intelligence, IJCAI 2023, 19th-25th August 2023, Macao, SAR, China: ijcai.org, 2023.
, "Sign prediction in social networks based on users reputation and optimism", Social Network Analysis and Mining, vol. 6, pp. 91, 2016.
, "Inference of Infrastructure Network Flows via Physics-Inspired Implicit Neural Networks", IEEE Conference on Control Technology and Applications, CCTA 2023, Bridgetown, Barbados, August 16-18, 2023: IEEE, 2023.
, "On Multi-Dimensional Team Formation", Proceedings of the 31st Canadian Conference on Computational Geometry, CCCG 2019, August 8-10, 2019, University of Alberta, Edmonton, Alberta, Canada, 2019.
, "Efficient and Robust Detection of Duplicate Videos in a Large Database", {IEEE} Trans. Circuits Syst. Video Techn., vol. 20, no. 6, pp. 870–885, 2010.
, "Indexing the Earth Mover's Distance Using Normal Distributions", CoRR, vol. abs/1111.7168, 2011.
, "Quantifying spatial relationships from whole retinal images", Bioinformatics, vol. 29, no. 7, pp. 940–946, 2013.
, "Indexing the Earth Mover's Distance Using Normal Distributions", {PVLDB}, vol. 5, no. 3, pp. 205–216, 2011.
, "Beyond Models: Forecasting Complex Network Processes Directly from Data", Proceedings of the 24th International Conference on World Wide Web, {WWW} 2015, Florence, Italy, May 18-22, 2015, pp. 885–895, 2015.
, "Applications of Top-k Representative Queries", Proceedings of the Sixth Workshop on Semantic Web Information Management, {SWIM} 2014, Snowbird, UT, USA, June 22-27, 2014, pp. 40:1–40:2, 2014.
, "Mining Statistically Significant Molecular Substructures for Efficient Molecular Classification", Journal of Chemical Information and Modeling, vol. 49, no. 11, pp. 2537–2550, 2009.
, "Answering Top-k Queries Over a Mixture of Attractive and Repulsive Dimensions", {PVLDB}, vol. 5, no. 3, pp. 169–180, 2011.
, "Indexing and mining topological patterns for drug discovery", 15th International Conference on Extending Database Technology, {EDBT} '12, Berlin, Germany, March 27-30, 2012, Proceedings, pp. 562–565, 2012.
, "Novel Method for Pharmacophore Analysis by Examining the Joint Pharmacophore Space", Journal of Chemical Information and Modeling, vol. 51, no. 5, pp. 1106–1121, 2011.
, "Answering Top-k Queries Over a Mixture of Attractive and Repulsive Dimensions", CoRR, vol. abs/1111.7165, 2011.
, "GraphSig: A Scalable Approach to Mining Significant Subgraphs in Large Graph Databases", Proceedings of the 25th International Conference on Data Engineering, {ICDE} 2009, March 29 2009 - April 2 2009, Shanghai, China, pp. 844–855, 2009.
, "Answering top-k representative queries on graph databases", International Conference on Management of Data, {SIGMOD} 2014, Snowbird, UT, USA, June 22-27, 2014, pp. 1163–1174, 2014.
, "Mining discriminative subgraphs from global-state networks", The 19th {ACM} {SIGKDD} International Conference on Knowledge Discovery and Data Mining, {KDD} 2013, Chicago, IL, USA, August 11-14, 2013, pp. 509–517, 2013.
, "Browsing and placement of multi-resolution images on parallel disks", Multimedia Syst., vol. 8, no. 6, pp. 459–469, 2003.
, "On Critical Event Observability Using Social Networks: A Disaster Monitoring Perspective", Military Communications Conference (MILCOM), 2014 IEEE: IEEE, 2014.
, "Mining Evolving Network Processes", 2013 {IEEE} 13th International Conference on Data Mining, Dallas, TX, USA, December 7-10, 2013, pp. 537–546, 2013.
, "SigSpot: mining significant anomalous regions from time-evolving networks (abstract only)", Proceedings of the {ACM} {SIGMOD} International Conference on Management of Data, {SIGMOD} 2012, Scottsdale, AZ, USA, May 20-24, 2012, pp. 865, 2012.
, "Efficient multicasting for delay tolerant networks using graph indexing", Proceedings of the {IEEE} {INFOCOM} 2012, Orlando, FL, USA, March 25-30, 2012, pp. 1386–1394, 2012.
, "Distributed Spatial Clustering in Sensor Networks", Advances in Database Technology - {EDBT} 2006, 10th International Conference on Extending Database Technology, Munich, Germany, March 26-31, 2006, Proceedings, pp. 980–1000, 2006.
, "DIST: a distributed spatio-temporal index structure for sensor networks", Proceedings of the 2005 {ACM} {CIKM} International Conference on Information and Knowledge Management, Bremen, Germany, October 31 - November 5, 2005, pp. 139–146, 2005.
, "Making a Small World Smaller: Path Optimization in Networks", IEEE Transactions on Knowledge and Data Engineering (TKDE), 2018.
, "Approximate Algorithms for Data-driven Influence Limitation", IEEE Transactions on Knowledge and Data Engineering (TKDE), 2020.
, "Group centrality maximization via network design", SIAM International Conference on Data Mining (SDM), 2018.
, "A Game Theoretic Approach For Core Resilience", IJCAI, 2020.
, "Towards Scalable Network Delay Minimization", {IEEE} 16th International Conference on Data Mining, {ICDM} 2016, December 12-15, 2016, Barcelona, Spain, 2016.
, "A Game Theoretic Approach For k-Core Minimization ", AAMAS, 2020.
, "Approximate Algorithms for Data-Driven Influence Limitation", IEEE Trans. Knowl. Data Eng., vol. 34, pp. 2641–2652, 2022.
, "Noticeable Network Delay Minimization via Node Upgrades", International Conference on Very Large Data Bases (VLDB), 2018.
, "Predictive Modeling and Scalability Analysis for Large Graph Analytics", IFIP/IEEE International Symposium on Integrated Network Management, {IM} 2017, 8-12 May, Lisbon, Portugal, 2017.
, "GCOMB: Learning Budget-constrained Combinatorial Algorithms over Billion-sized Graphs", Thirty-fourth Conference on Neural Information Processing Systems (NeurIPS), 2020.
, "RRW: repeated random walks on genome-scale protein networks for local cluster discovery", {BMC} Bioinformatics, vol. 10, pp. 283, 2009.
, "Reachability Analysis and Modeling of Dynamic Event Networks", Machine Learning and Knowledge Discovery in Databases - European Conference, {ECML} {PKDD} 2012, Bristol, UK, September 24-28, 2012. Proceedings, Part {I}, pp. 442–457, 2012.
, "Content-based Modeling and Prediction of Information Dissemination", International Conference on Advances in Social Networks Analysis and Mining, {ASONAM} 2011, Kaohsiung, Taiwan, 25-27 July 2011, pp. 21–28, 2011.
, "I act, therefore I judge: network sentiment dynamics based on user activity change", Advances in Social Networks Analysis and Mining 2013, {ASONAM} '13, Niagara, ON, Canada - August 25 - 29, 2013, pp. 396–402, 2013.
, "Scalable Discovery of Best Clusters on Large Graphs", {PVLDB}, vol. 3, no. 1, pp. 693–702, 2010.
, "Fragment-based Pretraining and Finetuning on Molecular Graphs", Thirty-seventh Conference on Neural Information Processing Systems (NeurIPS), 2023.
, "Probabilistic Segmentation and Analysis of Horizontal Cells", Proceedings of the 6th {IEEE} International Conference on Data Mining {(ICDM} 2006), 18-22 December 2006, Hong Kong, China, pp. 980–985, 2006.
, "Indexing Spatially Sensitive Distance Measures Using Multi-resolution Lower Bounds", Advances in Database Technology - {EDBT} 2006, 10th International Conference on Extending Database Technology, Munich, Germany, March 26-31, 2006, Proceedings, pp. 865–883, 2006.
, "APLA: Indexing Arbitrary Probability Distributions", Proceedings of the 23rd International Conference on Data Engineering, {ICDE} 2007, The Marmara Hotel, Istanbul, Turkey, April 15-20, 2007, pp. 946–955, 2007.
, "LB-Index: A Multi-Resolution Index Structure for Images", Proceedings of the 22nd International Conference on Data Engineering, {ICDE} 2006, 3-8 April 2006, Atlanta, GA, {USA}, pp. 144, 2006.
, "Top-k Spatial Joins of Probabilistic Objects", Proceedings of the 24th International Conference on Data Engineering, {ICDE} 2008, April 7-12, 2008, Cancún, México, pp. 566–575, 2008.
, "Computationally Designed Molecules Modulate ALS-Related Amyloidogenic TDP-43307–319 Aggregation", ACS Chemical Neuroscience, vol. 14, pp. 4395–4408, 2023.
, "Mind Reader: Reconstructing complex images from brain activities", Thirty-sixth Conference on Neural Information Processing Systems (NeurIPS), 2022.
, "Deep Representations for Time-varying Brain Datasets", KDD '22: The 28th ACM SIGKDD Conference on Knowledge Discovery and Data Mining, Washington, DC, USA, August 14 - 18, 2022: ACM, 2022.
, "Dynamic Query-Based Debugging of Object-Oriented Programs", Autom. Softw. Eng., vol. 10, no. 1, pp. 39–74, 2003.
, "Sensing for Mobile Objects", Managing and Mining Sensor Data, pp. 299–348, 2013.
, "Efficient tracking and querying for coordinated uncertain mobile objects", 29th {IEEE} International Conference on Data Engineering, {ICDE} 2013, Brisbane, Australia, April 8-12, 2013, pp. 182–193, 2013.
, "Synopses for probabilistic data over large domains", {EDBT} 2011, 14th International Conference on Extending Database Technology, Uppsala, Sweden, March 21-24, 2011, Proceedings, pp. 389–400, 2011.
, "A Latent Parameter Node-Centric Model for Spatial Networks", CoRR, vol. abs/1210.4246, 2012.
, "Modulating ALS-Related Amyloidogenic TDP-43307–319 Oligomeric Aggregates with Computationally Derived Therapeutic Molecules", Biochemistry, vol. 59, pp. 499–508, 2019.
, "Faster Similarity Search for Multimedia Data Via Query Transformations", Int. J. Image Graphics, vol. 3, no. 1, pp. 3–30, 2003.
, "Discovery of LRRK2 inhibitors using sequential in silico joint pharmacophore space (JPS) and ensemble docking", Bioorganic & medicinal chemistry letters, vol. 25, pp. 2713–2719, 2015.
, "Bisque: a platform for bioimage analysis and management", Bioinformatics, vol. 26, no. 4, pp. 544–552, 2010.
, "Bisque: Advances in Bioimage Databases", {IEEE} Data Eng. Bull., vol. 35, no. 3, pp. 56–64, 2012.
, "SPREE: Object Prefetching for Mobile Computers", On the Move to Meaningful Internet Systems 2004: CoopIS, DOA, and ODBASE, {OTM} Confederated International Conferences, Agia Napa, Cyprus, October 25-29, 2004, Proceedings, Part {II}, pp. 1340–1357, 2004.
, "AI Decision Systems with Feedback Loop Active Learner", WSDM Crowd Science Workshop, 2023.
, "Graph Macro Dynamics with Self-Attention for Event Detection", Deep Learning on Graphs: Methods and Applications (DLG-AAAI), 02/2023.
, "Global Counterfactual Explainer for Graph Neural Networks", Web Search and Data Mining (WSDM), 02/2023.
, "GNNX-BENCH: Unravelling the Utility of Perturbation-based GNN Explainers through In-depth Benchmarking", The Twelfth International Conference on Learning Representations (ICLR), 2024.
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