Publications

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Bhattacharya, A., V. Ljosa, J-Y. Pan, M. R. Verardo, H-J. Yang, C. Faloutsos, and A. K. Singh, "ViVo: Visual Vocabulary Construction for Mining Biomedical Images", Proceedings of the 5th {IEEE} International Conference on Data Mining {(ICDM} 2005), 27-30 November 2005, Houston, Texas, {USA}, pp. 50–57, 2005.
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Chipman, K. C., and A. K. Singh, "Using Stochastic Causal Trees to Augment Bayesian Networks for Modeling eQTL Datasets", {BMC} Bioinformatics, vol. 12, pp. 7, 2011.
Bulut, A., and A. K. Singh, "A Unified Framework for Monitoring Data Streams in Real Time", Proceedings of the 21st International Conference on Data Engineering, {ICDE} 2005, 5-8 April 2005, Tokyo, Japan, pp. 44–55, 2005.
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Ye, W., Z. Wang, R. Redberg, and A. K. Singh, "Tree++: Truncated Tree Based Graph Kernels", IEEE Trans. Knowl. Data Eng., vol. 33, pp. 1778–1789, 2021.
Medya, S., P. Bogdanov, and A. K. Singh, "Towards Scalable Network Delay Minimization", {IEEE} 16th International Conference on Data Mining, {ICDM} 2016, December 12-15, 2016, Barcelona, Spain, 2016.
Zong, B., Y. Wu, J. Song, A. K. Singh, H. \ cCam, J. Han, and X. Yan, "Towards scalable critical alert mining", The 20th {ACM} {SIGKDD} International Conference on Knowledge Discovery and Data Mining, {KDD} '14, New York, NY, {USA} - August 24 - 27, 2014, pp. 1057–1066, 2014.
Zong, B., Y. Wu, J. Song, A. K. Singh, H. \ cCam, J. Han, and X. Yan, "Towards scalable critical alert mining", The 20th {ACM} {SIGKDD} International Conference on Knowledge Discovery and Data Mining, {KDD} '14, New York, NY, {USA} - August 24 - 27, 2014, pp. 1057–1066, 2014.
cCamoglu, O. \, T. Kahveci, and A. K. Singh, "Towards Index-based Similarity Search for Protein Structure Databases", 2nd {IEEE} Computer Society Bioinformatics Conference, {CSB} 2003, Stanford, CA, USA, August 11-14, 2003, pp. 148–158, 2003.
Bogdanov, P., N. D. Larusso, and A. K. Singh, "Towards Community Discovery in Signed Collaborative Interaction Networks", {ICDMW} 2010, The 10th {IEEE} International Conference on Data Mining Workshops, Sydney, Australia, 13 December 2010, pp. 288–295, 2010.
Ciftcioglu, E. N., S. Pal, K. S. Chan, D. H. Cansever, A. Swami, A. K. Singh, and P. Basu, "Topology design under adversarial dynamics", 14th International Symposium on Modeling and Optimization in Mobile, Ad Hoc, and Wireless Networks, WiOpt 2016, Tempe, AZ, USA, May 9-13, 2016, 2016.
Ciftcioglu, E. N., S. Pal, K. S. Chan, D. H. Cansever, A. Swami, A. K. Singh, and P. Basu, "Topology design under adversarial dynamics", 14th International Symposium on Modeling and Optimization in Mobile, Ad Hoc, and Wireless Networks, WiOpt 2016, Tempe, AZ, USA, May 9-13, 2016, 2016.
Ciftcioglu, E. Necdet, S. Pal, K. S. Chan, D. H. Cansever, A. Swami, A. K. Singh, and P. Basu, "Topology Design Games and Dynamics in Adversarial Environments", IEEE Journal on Selected Areas in Communications, vol. 35, pp. 628–642, 2017.
Ciftcioglu, E. Necdet, S. Pal, K. S. Chan, D. H. Cansever, A. Swami, A. K. Singh, and P. Basu, "Topology Design Games and Dynamics in Adversarial Environments", IEEE Journal on Selected Areas in Communications, vol. 35, pp. 628–642, 2017.
Ljosa, V., and A. K. Singh, "Top-k Spatial Joins of Probabilistic Objects", Proceedings of the 24th International Conference on Data Engineering, {ICDE} 2008, April 7-12, 2008, Cancún, México, pp. 566–575, 2008.
Kang, B., H. Wright, T. Höllerer, A. K. Singh, and J. O’Donovan, "Through the Grapevine: A Comparison of News in Microblogs and Traditional Media", Trends in Social Network Analysis: Information Propagation, User Behavior Modeling, Forecasting, and Vulnerability Assessment, pp. 135–168, 2017.
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Larusso, N. D., and A. K. Singh, "Synopses for probabilistic data over large domains", {EDBT} 2011, 14th International Conference on Extending Database Technology, Uppsala, Sweden, March 21-24, 2011, Proceedings, pp. 389–400, 2011.
Bulut, A., and A. K. Singh, "SWAT: Hierarchical Stream Summarization in Large Networks", Proceedings of the 19th International Conference on Data Engineering, March 5-8, 2003, Bangalore, India, pp. 303–314, 2003.
Kocayusufoglu, F., M. X. Hoang, and A. K. Singh, "Summarizing Network Processes with Network-constrained Boolean Matrix Factorization", IEEE International Conference on Data Mining (ICDM), 2018.
Dang, X. Hong, H. You, A. K. Singh, and S. Grafton, "Subnetwork Mining with Spatial and Temporal Smoothness", SIAM international conference on data mining (SDM), 2017.
Hoang, M. X., R. Ramanathan, and A. K. Singh, "Structure and evolution of missed collaborations in large networks", 2014 Proceedings {IEEE} {INFOCOM} Workshops, Toronto, ON, Canada, April 27 - May 2, 2014, pp. 849–854, 2014.
Wu, J., Z. Guan, Q. Zhang, A. K. Singh, and X. Yan, "Static and Dynamic Structural Correlations in Graphs", {IEEE} Trans. Knowl. Data Eng., vol. 25, no. 9, pp. 2147–2160, 2013.
Kvilekval, K., and A. K. Singh, "SPREE: Object Prefetching for Mobile Computers", On the Move to Meaningful Internet Systems 2004: CoopIS, DOA, and ODBASE, {OTM} Confederated International Conferences, Agia Napa, Cyprus, October 25-29, 2004, Proceedings, Part {II}, pp. 1340–1357, 2004.
Stück, D., H. T. Hallgrímsson, G. Ver Steeg, A. Epasto, and L. Foschini, "The Spread of Physical Activity Through Social Networks", Proceedings of the 26th International Conference on World Wide Web: ACM, 2017.
Stück, D., H. T. Hallgrímsson, G. Ver Steeg, A. Epasto, and L. Foschini, "The Spread of Physical Activity Through Social Networks", Proceedings of the 26th International Conference on World Wide Web: ACM, 2017.
Kahveci, T., V. Ljosa, and A. K. Singh, "Speeding up whole-genome alignment by indexing frequency vectors", Bioinformatics, vol. 20, no. 13, pp. 2122–2134, 2004.
Silva, A., A. Singh, and A. Swami, " Spectral Algorithms for Temporal Graph Cuts", The Web Conference (WWW), 2018.
Silva, A., A. Singh, and A. Swami, " Spectral Algorithms for Temporal Graph Cuts", The Web Conference (WWW), 2018.
Silva, A., A. Singh, and A. Swami, " Spectral Algorithms for Temporal Graph Cuts", The Web Conference (WWW), 2018.
Hallgrímsson, H. T., M. Cieslak, L. Foschini, S. T. Grafton, and A. K. Singh, "Spatial coherence of oriented white matter microstructure: Applications to white matter regions associated with genetic similarity", NeuroImage, 2018.
Bogdanov, P., M. Busch, J. Moehlis, A. K. Singh, and B. K. Szymanski, "The social media genome: modeling individual topic-specific behavior in social media", Advances in Social Networks Analysis and Mining 2013, {ASONAM} '13, Niagara, ON, Canada - August 25 - 29, 2013, pp. 236–242, 2013.
Bogdanov, P., M. Busch, J. Moehlis, A. K. Singh, and B. K. Szymanski, "The social media genome: modeling individual topic-specific behavior in social media", Advances in Social Networks Analysis and Mining 2013, {ASONAM} '13, Niagara, ON, Canada - August 25 - 29, 2013, pp. 236–242, 2013.
Bogdanov, P., M. Busch, J. Moehlis, A. K. Singh, and B. K. Szymanski, "The Social Media Genome: Modeling Individual Topic-Specific Behavior in Social Media", CoRR, vol. abs/1307.0309, 2013.
Bogdanov, P., M. Busch, J. Moehlis, A. K. Singh, and B. K. Szymanski, "The Social Media Genome: Modeling Individual Topic-Specific Behavior in Social Media", CoRR, vol. abs/1307.0309, 2013.
Singh, V., and A. K. Singh, "SIMP: accurate and efficient near neighbor search in high dimensional spaces", 15th International Conference on Extending Database Technology, {EDBT} '12, Berlin, Germany, March 27-30, 2012, Proceedings, pp. 492–503, 2012.
Singh, V., and A. K. Singh, "SIMP: accurate and efficient near neighbor search in high dimensional spaces", 15th International Conference on Extending Database Technology, {EDBT} '12, Berlin, Germany, March 27-30, 2012, Proceedings, pp. 492–503, 2012.
Mongiov\`ı, M., P. Bogdanov, R. Ranca, A. K. Singh, E. E. Papalexakis, and C. Faloutsos, "SigSpot: mining significant anomalous regions from time-evolving networks (abstract only)", Proceedings of the {ACM} {SIGMOD} International Conference on Management of Data, {SIGMOD} 2012, Scottsdale, AZ, USA, May 20-24, 2012, pp. 865, 2012.
Shahriari, M., O. Askarisich Sichani, J. Gharibshah, and M. Jalili, "Sign prediction in social networks based on users reputation and optimism", Social Network Analysis and Mining, vol. 6, pp. 91, 2016.
Shahriari, M., O. Askarisich Sichani, J. Gharibshah, and M. Jalili, "Sign prediction in social networks based on users reputation and optimism", Social Network Analysis and Mining, vol. 6, pp. 91, 2016.
Larusso, N. D., and A. K. Singh, "Sensing for Mobile Objects", Managing and Mining Sensor Data, pp. 299–348, 2013.
Feng, Y., D. Agrawal, A. El Abbadi, and A. K. Singh, "Scalable ranking for preference queries", Proceedings of the 2005 {ACM} {CIKM} International Conference on Information and Knowledge Management, Bremen, Germany, October 31 - November 5, 2005, pp. 313–314, 2005.
Singh, A. K., "Scalable Index Structures for Biological Data", Data Mining in Bioinformatics, pp. 275–296, 2005.
Macropol, K., and A. K. Singh, "Scalable Discovery of Best Clusters on Large Graphs", {PVLDB}, vol. 3, no. 1, pp. 693–702, 2010.
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Macropol, K., T. Can, and A. K. Singh, "RRW: repeated random walks on genome-scale protein networks for local cluster discovery", {BMC} Bioinformatics, vol. 10, pp. 283, 2009.
Macropol, K., and A. K. Singh, "Reachability Analysis and Modeling of Dynamic Event Networks", Machine Learning and Knowledge Discovery in Databases - European Conference, {ECML} {PKDD} 2012, Bristol, UK, September 24-28, 2012. Proceedings, Part {I}, pp. 442–457, 2012.
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Singh, V., A. Bhattacharya, and A. K. Singh, "Querying spatial patterns", {EDBT} 2010, 13th International Conference on Extending Database Technology, Lausanne, Switzerland, March 22-26, 2010, Proceedings, pp. 418–429, 2010.
Singh, V., A. Bhattacharya, and A. K. Singh, "Querying spatial patterns", {EDBT} 2010, 13th International Conference on Extending Database Technology, Lausanne, Switzerland, March 22-26, 2010, Proceedings, pp. 418–429, 2010.
Singh, A. K., "Querying and Mining Biological Databases", {OMICS}, vol. 7, no. 1, pp. 7–8, 2003.
He, H., and A. K. Singh, "Query Language and Access Methods for Graph Databases", Managing and Mining Graph Data, pp. 125–160, 2010.
Ruttenberg, B. E., G. Luna, G. P. Lewis, S. K. Fisher, and A. K. Singh, "Quantifying spatial relationships from whole retinal images", Bioinformatics, vol. 29, no. 7, pp. 940–946, 2013.
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cCamoglu, O. \, T. Kahveci, and A. K. Singh, "PSI: indexing protein structures for fast similarity search", Proceedings of the Eleventh International Conference on Intelligent Systems for Molecular Biology, June 29 - July 3, 2003, Brisbane, Australia, pp. 81–83, 2003.
Kahveci, T., and A. K. Singh, "Progressive Searching of Biological Sequences", {IEEE} Data Eng. Bull., vol. 27, no. 3, pp. 32–39, 2004.
Bhattacharya, A., T. Can, T. Kahveci, A. K. Singh, and Y-F. Wang, "ProGreSS: Simultaneous Searching of Protein Databases by Sequence and Structure", Biocomputing 2004, Proceedings of the Pacific Symposium, Hawaii, USA, 6-10 January 2004, pp. 264–275, 2004.
Singh, V., and A. K. Singh, "Profile Based Sub-Image Search in Image Databases", CoRR, vol. abs/1010.1496, 2010.
Singh, V., and A. K. Singh, "Profile Based Sub-Image Search in Image Databases", CoRR, vol. abs/1010.1496, 2010.
Proceedings of the 29th ACM SIGKDD Conference on Knowledge Discovery and Data Mining, KDD 2023, Long Beach, CA, USA, August 6-10, 2023: ACM, 2023.
Proceedings of the 29th ACM SIGKDD Conference on Knowledge Discovery and Data Mining, KDD 2023, Long Beach, CA, USA, August 6-10, 2023: ACM, 2023.
Ljosa, V., and A. K. Singh, "Probabilistic Segmentation and Analysis of Horizontal Cells", Proceedings of the 6th {IEEE} International Conference on Data Mining {(ICDM} 2006), 18-22 December 2006, Hong Kong, China, pp. 980–985, 2006.
Askarisichani, O., F. Bullo, N. E. Friedkin, and A. K. Singh, "Predictive models for human–AI nexus in group decision making", Annals of the New York Academy of Sciences, vol. 1514, pp. 70–81, 2022.
Medya, S., L. Cherkasova, and A. K. Singh, "Predictive Modeling and Scalability Analysis for Large Graph Analytics", IFIP/IEEE International Symposium on Integrated Network Management, {IM} 2017, 8-12 May, Lisbon, Portugal, 2017.
Chipman, K. C., and A. K. Singh, "Predicting genetic interactions with random walks on biological networks", {BMC} Bioinformatics, vol. 10, 2009.
Huang, Z., A. Silva, and A. K. Singh, "POLE: Polarized Embedding for Signed Networks", WSDM '22: The Fifteenth ACM International Conference on Web Search and Data Mining, Virtual Event / Tempe, AZ, USA, February 21 - 25, 2022: ACM, 2022.
Huang, Z., A. Silva, and A. K. Singh, "POLE: Polarized Embedding for Signed Networks", WSDM '22: The Fifteenth ACM International Conference on Web Search and Data Mining, Virtual Event / Tempe, AZ, USA, February 21 - 25, 2022: ACM, 2022.
Amelkin, V., F. Bullo, and A. K. Singh, "Polar Opinion Dynamics in Social Networks", IEEE Transactions on Automatic Control (TAC), 2017.
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Dang, X-H., A. Silva, A. Singh, A. Swami, and P. Basu, "Outlier Detection from Network Data with Subnetwork Interpretation", IEEE International Conference Data Mining (ICDM), 2016.
Dang, X-H., A. Silva, A. Singh, A. Swami, and P. Basu, "Outlier Detection from Network Data with Subnetwork Interpretation", IEEE International Conference Data Mining (ICDM), 2016.
Dang, X-H., A. Silva, A. Singh, A. Swami, and P. Basu, "Outlier Detection from Network Data with Subnetwork Interpretation", IEEE International Conference Data Mining (ICDM), 2016.
Kahveci, T., and A. K. Singh, "Optimizing Similarity Search for Arbitrary Length Time Series Queries", {IEEE} Trans. Knowl. Data Eng., vol. 16, no. 4, pp. 418–433, 2004.
Bulut, A., N. Koudas, A. Meka, A. K. Singh, and D. Srivastava, "Optimization Techniques for Reactive Network Monitoring", {IEEE} Trans. Knowl. Data Eng., vol. 21, no. 9, pp. 1343–1357, 2009.
Bulut, A., N. Koudas, A. Meka, A. K. Singh, and D. Srivastava, "Optimization Techniques for Reactive Network Monitoring", {IEEE} Trans. Knowl. Data Eng., vol. 21, no. 9, pp. 1343–1357, 2009.
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Ranu, S., and A. K. Singh, "Novel Method for Pharmacophore Analysis by Examining the Joint Pharmacophore Space", Journal of Chemical Information and Modeling, vol. 51, no. 5, pp. 1106–1121, 2011.
Medya, S., J. Vachery, S. Ranu, and A. Singh, "Noticeable Network Delay Minimization via Node Upgrades", International Conference on Very Large Data Bases (VLDB), 2018.
Bogdanov, P., C. Faloutsos, M. Mongiov\`ı, E. E. Papalexakis, R. Ranca, and A. K. Singh, "NetSpot: Spotting Significant Anomalous Regions on Dynamic Networks", Proceedings of the 13th {SIAM} International Conference on Data Mining, May 2-4, 2013. Austin, Texas, {USA.}, pp. 28–36, 2013.
Singh, V., and A. K. Singh, "Nearest Keyword Set Search in Multi-dimensional Datasets", CoRR, vol. abs/1409.3867, 2014.
Singh, V., and A. K. Singh, "Nearest Keyword Set Search in Multi-dimensional Datasets", CoRR, vol. abs/1409.3867, 2014.
Singh, V., B. Zong, and A. K. Singh, "Nearest Keyword Set Search in Multi-Dimensional Datasets", {IEEE} Trans. Knowl. Data Eng., vol. 28, pp. 741–755, 2016.
Singh, V., B. Zong, and A. K. Singh, "Nearest Keyword Set Search in Multi-Dimensional Datasets", {IEEE} Trans. Knowl. Data Eng., vol. 28, pp. 741–755, 2016.
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Kocayusufoglu, F., T. Wu, A. Singh, G. Roumpos, H-T. Cheng, S. Jain, E. H. Chi, and A. K. Singh, "Multi-Resolution Attention for Personalized Item Search", WSDM '22: The Fifteenth ACM International Conference on Web Search and Data Mining, Virtual Event / Tempe, AZ, USA, February 21 - 25, 2022: ACM, 2022.
Kocayusufoglu, F., T. Wu, A. Singh, G. Roumpos, H-T. Cheng, S. Jain, E. H. Chi, and A. K. Singh, "Multi-Resolution Attention for Personalized Item Search", WSDM '22: The Fifteenth ACM International Conference on Web Search and Data Mining, Virtual Event / Tempe, AZ, USA, February 21 - 25, 2022: ACM, 2022.
Schibler, T., A. K. Singh, and S. Suri, "On Multi-Dimensional Team Formation", Proceedings of the 31st Canadian Conference on Computational Geometry, CCCG 2019, August 8-10, 2019, University of Alberta, Edmonton, Alberta, Canada, 2019.
Schibler, T., A. K. Singh, and S. Suri, "On Multi-Dimensional Team Formation", Proceedings of the 31st Canadian Conference on Computational Geometry, CCCG 2019, August 8-10, 2019, University of Alberta, Edmonton, Alberta, Canada, 2019.
Schibler, T., A. K. Singh, and S. Suri, "On Multi-Dimensional Team Formation", Proceedings of the 31st Canadian Conference on Computational Geometry, CCCG 2019, August 8-10, 2019, University of Alberta, Edmonton, Alberta, Canada, 2019.
Bogdanov, P., and A. K. Singh, "Molecular Function Prediction Using Neighborhood Features", {IEEE/ACM} Trans. Comput. Biology Bioinform., vol. 7, no. 2, pp. 208–217, 2010.
Laos, V., D. Bishop, C. A. Lang, N. M. Marsh, K. Lazar Cantrell, S. K. Buratto, A. K. Singh, and M. T. Bowers, "Modulating ALS-Related Amyloidogenic TDP-43307–319 Oligomeric Aggregates with Computationally Derived Therapeutic Molecules", Biochemistry, vol. 59, pp. 499–508, 2019.
Jones, A. T., N. E. Friedkin, and A. K. Singh, "Modeling the Co-evolution of Committee Formation and Awareness Networks in Organizations", Complex Networks & Their Applications VI - Proceedings of Complex Networks 2017 (The Sixth International Conference on Complex Networks and Their Applications), COMPLEX NETWORKS 2017, Lyon, France, November 29 - December 1, 2017: Springer, 2017.
Bogdanov, P., M. Busch, J. Moehlis, A. K. Singh, and B. K. Szymanski, "Modeling individual topic-specific behavior and influence backbone networks in social media", Social Netw. Analys. Mining, vol. 4, no. 1, pp. 204, 2014.
Bogdanov, P., M. Busch, J. Moehlis, A. K. Singh, and B. K. Szymanski, "Modeling individual topic-specific behavior and influence backbone networks in social media", Social Netw. Analys. Mining, vol. 4, no. 1, pp. 204, 2014.
Ye, W., F. Bullo, N. E. Friedkin, and A. K. Singh, "Modeling Human-AI Team Decision Making", CoRR, vol. abs/2201.02759, 2022.
Singh, A. K., "Modeling Complex Diseases Using Discriminative Network Fragments - (Invited Keynote Talk)", Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings, pp. 249, 2012.
Bhattacharya, A., A. Meka, and A. K. Singh, "MIST: Distributed Indexing and Querying in Sensor Networks using Statistical Models", Proceedings of the 33rd International Conference on Very Large Data Bases, University of Vienna, Austria, September 23-27, 2007, pp. 854–865, 2007.
Ranu, S., and A. K. Singh, "Mining Statistically Significant Molecular Substructures for Efficient Molecular Classification", Journal of Chemical Information and Modeling, vol. 49, no. 11, pp. 2537–2550, 2009.
Bogdanov, P., M. Mongiov\`ı, and A. K. Singh, "Mining Heavy Subgraphs in Time-Evolving Networks", 11th {IEEE} International Conference on Data Mining, {ICDM} 2011, Vancouver, BC, Canada, December 11-14, 2011, pp. 81–90, 2011.
Mongiov\`ı, M., P. Bogdanov, and A. K. Singh, "Mining Evolving Network Processes", 2013 {IEEE} 13th International Conference on Data Mining, Dallas, TX, USA, December 7-10, 2013, pp. 537–546, 2013.
Ranu, S., M. X. Hoang, and A. K. Singh, "Mining discriminative subgraphs from global-state networks", The 19th {ACM} {SIGKDD} International Conference on Knowledge Discovery and Data Mining, {KDD} 2013, Chicago, IL, USA, August 11-14, 2013, pp. 509–517, 2013.
Lin, S., T. Sprague, and A. K. Singh, "Mind Reader: Reconstructing complex images from brain activities", Thirty-sixth Conference on Neural Information Processing Systems (NeurIPS), 2022.
Lin, S., T. Sprague, and A. K. Singh, "Mind Reader: Reconstructing complex images from brain activities", Thirty-sixth Conference on Neural Information Processing Systems (NeurIPS), 2022.
Kahveci, T., and A. K. Singh, "MAP: Searching Large Genome Databases", Proceedings of the 8th Pacific Symposium on Biocomputing, {PSB} 2003, Lihue, Hawaii, USA, January 3-7, 2003, pp. 303–314, 2003.
Medya, S., P. Bogdanov, and A. Singh, "Making a Small World Smaller: Path Optimization in Networks", IEEE Transactions on Knowledge and Data Engineering (TKDE), 2018.
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Sharma, S., Y. Xian, N. Yu, and A. Singh, "Learning Prototype Classifiers for Long-Tailed Recognition", Proceedings of the Thirty-Second International Joint Conference on Artificial Intelligence, IJCAI 2023, 19th-25th August 2023, Macao, SAR, China: ijcai.org, 2023.
Sharma, S., Y. Xian, N. Yu, and A. Singh, "Learning Prototype Classifiers for Long-Tailed Recognition", Proceedings of the Thirty-Second International Joint Conference on Artificial Intelligence, IJCAI 2023, 19th-25th August 2023, Macao, SAR, China: ijcai.org, 2023.
Dang, X. Hong, H. You, P. Bogdanov, and A. K. Singh, "Learning Predictive Substructures with Regularization for Network Data", Data Mining (ICDM), 2015 IEEE International Conference on: IEEE, 2015.

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